Bugzilla – Attachment 125718 Details for
Bug 29135
OAI should not include biblionumbers from deleteditems when determining deletedbiblios
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[patch]
Bug 29135: Fix handling of deleted items in OAI-PMH provider
Bug-29135-Fix-handling-of-deleted-items-in-OAI-PMH.patch (text/plain), 22.32 KB, created by
David Nind
on 2021-10-05 03:23:37 UTC
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Description:
Bug 29135: Fix handling of deleted items in OAI-PMH provider
Filename:
MIME Type:
Creator:
David Nind
Created:
2021-10-05 03:23:37 UTC
Size:
22.32 KB
patch
obsolete
>From d87cae3aa14f785c6b33961f162d117f25aeb743 Mon Sep 17 00:00:00 2001 >From: Ere Maijala <ere.maijala@helsinki.fi> >Date: Thu, 30 Sep 2021 22:53:15 +0300 >Subject: [PATCH] Bug 29135: Fix handling of deleted items in OAI-PMH provider > >Test plan: >1. Make sure this scenario now works properly: https://bugs.koha-community.org/bugzilla3/show_bug.cgi?id=29135#c0 >2. Run prove -v t/db_dependent/OAI/ > >Signed-off-by: David Nind <david@davidnind.com> >--- > Koha/OAI/Server/GetRecord.pm | 51 ++-- > Koha/OAI/Server/ListBase.pm | 87 +++---- > t/db_dependent/OAI/Server.t | 343 +++++++++++++++++++++++++- > t/db_dependent/OAI/oaiconf_items.yaml | 11 + > 4 files changed, 412 insertions(+), 80 deletions(-) > create mode 100644 t/db_dependent/OAI/oaiconf_items.yaml > >diff --git a/Koha/OAI/Server/GetRecord.pm b/Koha/OAI/Server/GetRecord.pm >index 4e4985ea8e..5e51b2fb99 100644 >--- a/Koha/OAI/Server/GetRecord.pm >+++ b/Koha/OAI/Server/GetRecord.pm >@@ -35,56 +35,48 @@ sub new { > my ($biblionumber) = $args{identifier} =~ /^$prefix(.*)/; > my $items_included = $repository->items_included( $args{metadataPrefix} ); > my $dbh = C4::Context->dbh; >- my $sql = " >- SELECT timestamp >- FROM biblioitems >- WHERE biblionumber=? >- "; >+ my $sql; > my @bind_params = ($biblionumber); > if ( $items_included ) { > # Take latest timestamp of biblio and any items > # Or timestamp of deleted items where bib not deleted > $sql .= " >- UNION >+ SELECT timestamp >+ FROM biblio_metadata >+ WHERE biblionumber=? >+ UNION > SELECT deleteditems.timestamp FROM deleteditems JOIN biblio USING (biblionumber) >- WHERE deleteditems.biblionumber=? >- UNION >+ WHERE deleteditems.biblionumber=? >+ UNION > SELECT timestamp from items >- WHERE biblionumber=? >+ WHERE biblionumber=? > "; > push @bind_params, $biblionumber; > push @bind_params, $biblionumber; > $sql = " >- SELECT max(timestamp) >+ SELECT max(timestamp) as timestamp > FROM ($sql) bib > "; >+ } else { >+ $sql = " >+ SELECT max(timestamp) as timestamp >+ FROM biblio_metadata >+ WHERE biblionumber=? >+ "; > } > > my $sth = $dbh->prepare( $sql ) || die( 'Could not prepare statement: ' . $dbh->errstr ); > $sth->execute( @bind_params ) || die( 'Could not execute statement: ' . $sth->errstr ); > my ($timestamp, $deleted); >+ # If there are no rows in biblio_metadata, try deletedbiblio_metadata > unless ( ($timestamp = $sth->fetchrow) ) { > $sql = " >- SELECT timestamp >- FROM deletedbiblio >- WHERE biblionumber=? >+ SELECT max(timestamp) >+ FROM deletedbiblio_metadata >+ WHERE biblionumber=? > "; > @bind_params = ($biblionumber); > >- if ( $items_included ) { >- # Take latest timestamp among biblio and items >- $sql .= " >- UNION >- SELECT timestamp from deleteditems >- WHERE biblionumber=? >- "; >- push @bind_params, $biblionumber; >- $sql = " >- SELECT max(timestamp) >- FROM ($sql) bib >- "; >- } >- > $sth = $dbh->prepare($sql) || die('Could not prepare statement: ' . $dbh->errstr); > $sth->execute( @bind_params ) || die('Could not execute statement: ' . $sth->errstr); > unless ( ($timestamp = $sth->fetchrow) ) >@@ -113,10 +105,7 @@ sub new { > } else { > # We fetch it using this method, rather than the database directly, > # so it'll include the item data >- my $marcxml; >- $marcxml = $repository->get_biblio_marcxml($biblionumber, $args{metadataPrefix}) >- unless $deleted; >- >+ my $marcxml = $repository->get_biblio_marcxml($biblionumber, $args{metadataPrefix}); > $self->record( > Koha::OAI::Server::Record->new($repository, $marcxml, $timestamp, \@setSpecs, %args) > ); >diff --git a/Koha/OAI/Server/ListBase.pm b/Koha/OAI/Server/ListBase.pm >index 877f7c137d..4f1092d146 100644 >--- a/Koha/OAI/Server/ListBase.pm >+++ b/Koha/OAI/Server/ListBase.pm >@@ -62,75 +62,70 @@ sub GetRecords { > > my @part_bind_params = ($next_id); > >- my $where = "biblionumber >= ?"; >+ # Note: "main" is alias of the main table in the SELECT statement to avoid ambiquity with joined tables >+ my $where = "main.biblionumber >= ?"; > if ( $from ) { >- $where .= " AND timestamp >= ?"; >+ $where .= " AND main.timestamp >= ?"; > push @part_bind_params, $from; > } > if ( $until ) { >- $where .= " AND timestamp <= ?"; >+ $where .= " AND main.timestamp <= ?"; > push @part_bind_params, $until; > } > if ( defined $set ) { >- $where .= " AND biblionumber in (SELECT osb.biblionumber FROM oai_sets_biblios osb WHERE osb.set_id = ?)"; >+ $where .= " AND main.biblionumber in (SELECT osb.biblionumber FROM oai_sets_biblios osb WHERE osb.set_id = ?)"; > push @part_bind_params, $set->{'id'}; > } > > my @bind_params = @part_bind_params; > >- my $criteria = "WHERE $where ORDER BY biblionumber LIMIT " . ($max + 1); >+ my $order_limit = 'ORDER BY main.biblionumber LIMIT ' . ($max + 1); > >- my $sql = " >- SELECT biblionumber >- FROM $table >- $criteria >- "; >+ my $sql; >+ my $ts_sql; > > # If items are included, fetch a set of potential biblionumbers from items tables as well. > # Then merge them, sort them and take the required number of them from the resulting list. > # This may seem counter-intuitive as in worst case we fetch 3 times the biblionumbers needed, > # but avoiding joins or subqueries makes this so much faster that it does not matter. >- if ( $include_items ) { >- $sql = "($sql) UNION (SELECT DISTINCT(biblionumber) FROM deleteditems $criteria)"; >+ if ( $include_items && !$deleted ) { >+ $sql = " >+ (SELECT biblionumber >+ FROM $table main >+ WHERE $where $order_limit) >+ UNION >+ (SELECT DISTINCT(biblionumber) FROM deleteditems main JOIN biblio USING (biblionumber) WHERE $where >+ $order_limit) >+ UNION >+ (SELECT DISTINCT(biblionumber) FROM items main WHERE $where $order_limit)"; > push @bind_params, @part_bind_params; >- if (!$deleted) { >- $sql .= " UNION (SELECT DISTINCT(biblionumber) FROM items $criteria)"; >- push @bind_params, @part_bind_params; >- } >- $sql = "SELECT biblionumber FROM ($sql) bibnos ORDER BY biblionumber LIMIT " . ($max + 1); >+ push @bind_params, @part_bind_params; >+ $sql = "SELECT biblionumber FROM ($sql) main $order_limit"; >+ >+ $ts_sql = " >+ SELECT MAX(timestamp) >+ FROM ( >+ SELECT timestamp FROM biblio_metadata WHERE biblionumber = ? >+ UNION >+ SELECT timestamp FROM deleteditems WHERE biblionumber = ? >+ UNION >+ SELECT timestamp FROM items WHERE biblionumber = ? >+ ) bi >+ "; >+ } else { >+ $sql = " >+ SELECT biblionumber >+ FROM $table main >+ WHERE $where >+ "; >+ >+ $ts_sql = "SELECT max(timestamp) FROM $table WHERE biblionumber = ?"; > } > > my $sth = $dbh->prepare( $sql ) || die( 'Could not prepare statement: ' . $dbh->errstr ); >- $sth->execute( @bind_params ) || die( 'Could not execute statement: ' . $sth->errstr ); >- >- my $ts_sql; >- if ( $include_items ) { >- if ( $deleted ) { >- $ts_sql = " >- SELECT MAX(timestamp) >- FROM ( >- SELECT timestamp FROM deletedbiblio_metadata WHERE biblionumber = ? >- UNION >- SELECT timestamp FROM deleteditems WHERE biblionumber = ? >- ) bis >- "; >- } else { >- $ts_sql = " >- SELECT MAX(timestamp) >- FROM ( >- SELECT timestamp FROM biblio_metadata WHERE biblionumber = ? >- UNION >- SELECT timestamp FROM deleteditems WHERE biblionumber = ? >- UNION >- SELECT timestamp FROM items WHERE biblionumber = ? >- ) bi >- "; >- } >- } else { >- $ts_sql = "SELECT timestamp FROM $table WHERE biblionumber = ?"; >- } > my $ts_sth = $dbh->prepare( $ts_sql ) || die( 'Could not prepare statement: ' . $dbh->errstr ); > >+ $sth->execute( @bind_params ) || die( 'Could not execute statement: ' . $sth->errstr ); > foreach my $row (@{ $sth->fetchall_arrayref() }) { > my $biblionumber = $row->[0]; > $count++; >@@ -149,7 +144,7 @@ sub GetRecords { > last STAGELOOP; > } > my @params = ($biblionumber); >- if ( $include_items ) { >+ if ( $include_items && !$deleted ) { > push @params, $deleted ? ( $biblionumber ) : ( $biblionumber, $biblionumber ); > } > $ts_sth->execute( @params ) || die( 'Could not execute statement: ' . $ts_sth->errstr ); >diff --git a/t/db_dependent/OAI/Server.t b/t/db_dependent/OAI/Server.t >index 4c3e641583..990eeb33ec 100755 >--- a/t/db_dependent/OAI/Server.t >+++ b/t/db_dependent/OAI/Server.t >@@ -19,9 +19,9 @@ > > use Modern::Perl; > use Test::Deep qw( cmp_deeply re ); >-use Test::MockTime qw/set_fixed_time restore_time/; >+use Test::MockTime qw/set_fixed_time set_relative_time restore_time/; > >-use Test::More tests => 32; >+use Test::More tests => 33; > use DateTime; > use File::Basename; > use File::Spec; >@@ -31,8 +31,9 @@ use XML::Simple; > use YAML::XS; > > use t::lib::Mocks; >+use t::lib::TestBuilder; > >-use C4::Biblio qw( AddBiblio GetMarcBiblio ModBiblio ); >+use C4::Biblio qw( AddBiblio GetMarcBiblio ModBiblio DelBiblio ); > use C4::Context; > use C4::OAI::Sets qw(AddOAISet); > >@@ -510,3 +511,339 @@ subtest 'ListSets tests' => sub { > > $schema->storage->txn_rollback; > }; >+ >+subtest 'Tests for timestamp handling' => sub { >+ >+ plan tests => 27; >+ >+ t::lib::Mocks::mock_preference( 'OAI::PMH' => 1 ); >+ t::lib::Mocks::mock_preference( 'OAI-PMH:MaxCount' => 3 ); >+ t::lib::Mocks::mock_preference( 'OAI-PMH:ConfFile' => File::Spec->rel2abs(dirname(__FILE__)) . '/oaiconf_items.yaml' ); >+ >+ $schema->storage->txn_begin; >+ >+ my $sth_metadata = $dbh->prepare('UPDATE biblio_metadata SET timestamp=? WHERE biblionumber=?'); >+ my $sth_del_metadata = $dbh->prepare('UPDATE deletedbiblio_metadata SET timestamp=? WHERE biblionumber=?'); >+ my $sth_item = $dbh->prepare('UPDATE items SET timestamp=? WHERE itemnumber=?'); >+ my $sth_del_item = $dbh->prepare('UPDATE deleteditems SET timestamp=? WHERE itemnumber=?'); >+ >+ my $builder = t::lib::TestBuilder->new; >+ >+ set_fixed_time(CORE::time()); >+ >+ my $utc_datetime = dt_from_string(undef, undef, 'UTC'); >+ my $utc_timestamp = $utc_datetime->ymd . 'T' . $utc_datetime->hms . 'Z'; >+ my $timestamp = dt_from_string(undef, 'sql'); >+ >+ # Test a bib with one item >+ my $biblio1 = $builder->build_sample_biblio(); >+ $sth_metadata->execute($timestamp, $biblio1->biblionumber); >+ my $item1 = $builder->build_sample_item( >+ { >+ biblionumber => $biblio1->biblionumber >+ } >+ ); >+ $sth_item->execute($timestamp, $item1->itemnumber); >+ >+ my $list_items = { >+ verb => 'ListRecords', >+ metadataPrefix => 'marc21', >+ from => $utc_timestamp >+ }; >+ my $list_no_items = { >+ verb => 'ListRecords', >+ metadataPrefix => 'marcxml', >+ from => $utc_timestamp >+ }; >+ >+ my $get_items = { >+ verb => 'GetRecord', >+ metadataPrefix => 'marc21', >+ identifier => 'TEST:' . $biblio1->biblionumber >+ }; >+ my $get_no_items = { >+ verb => 'GetRecord', >+ metadataPrefix => 'marcxml', >+ identifier => 'TEST:' . $biblio1->biblionumber >+ }; >+ >+ my $expected = { >+ record => { >+ header => { >+ datestamp => $utc_timestamp, >+ identifier => 'TEST:' . $biblio1->biblionumber >+ }, >+ metadata => { >+ record => XMLin( >+ GetMarcBiblio({ biblionumber => $biblio1->biblionumber, embed_items => 1, opac => 1 })->as_xml_record() >+ ) >+ } >+ } >+ }; >+ my $expected_no_items = { >+ record => { >+ header => { >+ datestamp => $utc_timestamp, >+ identifier => 'TEST:' . $biblio1->biblionumber >+ }, >+ metadata => { >+ record => XMLin( >+ GetMarcBiblio({ biblionumber => $biblio1->biblionumber, embed_items => 0, opac => 1 })->as_xml_record() >+ ) >+ } >+ } >+ }; >+ >+ test_query( >+ 'ListRecords - biblio with a single item', >+ $list_items, >+ { ListRecords => $expected } >+ ); >+ test_query( >+ 'ListRecords - biblio with a single item (items not returned)', >+ $list_no_items, >+ { ListRecords => $expected_no_items } >+ ); >+ test_query( >+ 'GetRecord - biblio with a single item', >+ $get_items, >+ { GetRecord => $expected } >+ ); >+ test_query( >+ 'GetRecord - biblio with a single item (items not returned)', >+ $get_no_items, >+ { GetRecord => $expected_no_items } >+ ); >+ >+ # Add an item 10 seconds later and check results >+ set_relative_time(10); >+ >+ $utc_datetime = dt_from_string(undef, undef, 'UTC'); >+ $utc_timestamp = $utc_datetime->ymd . 'T' . $utc_datetime->hms . 'Z'; >+ $timestamp = dt_from_string(undef, 'sql'); >+ >+ my $item2 = $builder->build_sample_item( >+ { >+ biblionumber => $biblio1->biblionumber >+ } >+ ); >+ $sth_item->execute($timestamp, $item2->itemnumber); >+ >+ $expected->{record}{header}{datestamp} = $utc_timestamp; >+ $expected->{record}{metadata}{record} = XMLin( >+ GetMarcBiblio({ biblionumber => $biblio1->biblionumber, embed_items => 1, opac => 1 })->as_xml_record() >+ ); >+ >+ test_query( >+ 'ListRecords - biblio with two items', >+ $list_items, >+ { ListRecords => $expected } >+ ); >+ test_query( >+ 'ListRecords - biblio with two items (items not returned)', >+ $list_no_items, >+ { ListRecords => $expected_no_items } >+ ); >+ test_query( >+ 'GetRecord - biblio with a two items', >+ $get_items, >+ { GetRecord => $expected } >+ ); >+ test_query( >+ 'GetRecord - biblio with a two items (items not returned)', >+ $get_no_items, >+ { GetRecord => $expected_no_items } >+ ); >+ >+ # Set biblio timestamp 10 seconds later and check results >+ set_relative_time(10); >+ $utc_datetime = dt_from_string(undef, undef, 'UTC'); >+ $utc_timestamp= $utc_datetime->ymd . 'T' . $utc_datetime->hms . 'Z'; >+ $timestamp = dt_from_string(undef, 'sql'); >+ >+ $sth_metadata->execute($timestamp, $biblio1->biblionumber); >+ >+ $expected->{record}{header}{datestamp} = $utc_timestamp; >+ $expected_no_items->{record}{header}{datestamp} = $utc_timestamp; >+ >+ test_query( >+ "ListRecords - biblio with timestamp higher than item's", >+ $list_items, >+ { ListRecords => $expected } >+ ); >+ test_query( >+ "ListRecords - biblio with timestamp higher than item's (items not returned)", >+ $list_no_items, >+ { ListRecords => $expected_no_items } >+ ); >+ test_query( >+ "GetRecord - biblio with timestamp higher than item's", >+ $get_items, >+ { GetRecord => $expected } >+ ); >+ test_query( >+ "GetRecord - biblio with timestamp higher than item's (items not returned)", >+ $get_no_items, >+ { GetRecord => $expected_no_items } >+ ); >+ >+ # Delete an item 10 seconds later and check results >+ set_relative_time(10); >+ $utc_datetime = dt_from_string(undef, undef, 'UTC'); >+ $utc_timestamp = $utc_datetime->ymd . 'T' . $utc_datetime->hms . 'Z'; >+ >+ $item1->safe_delete({ skip_record_index =>1 }); >+ $sth_del_item->execute($timestamp, $item1->itemnumber); >+ >+ $expected->{record}{header}{datestamp} = $utc_timestamp; >+ $expected->{record}{metadata}{record} = XMLin( >+ GetMarcBiblio({ biblionumber => $biblio1->biblionumber, embed_items => 1, opac => 1 })->as_xml_record() >+ ); >+ >+ test_query( >+ 'ListRecords - biblio with existing and deleted item', >+ $list_items, >+ { ListRecords => $expected } >+ ); >+ test_query( >+ 'ListRecords - biblio with existing and deleted item (items not returned)', >+ $list_no_items, >+ { ListRecords => $expected_no_items } >+ ); >+ test_query( >+ 'GetRecord - biblio with existing and deleted item', >+ $get_items, >+ { GetRecord => $expected } >+ ); >+ test_query( >+ 'GetRecord - biblio with existing and deleted item (items not returned)', >+ $get_no_items, >+ { GetRecord => $expected_no_items } >+ ); >+ >+ # Delete also the second item and verify results >+ $item2->safe_delete({ skip_record_index =>1 }); >+ $sth_del_item->execute($timestamp, $item2->itemnumber); >+ >+ $expected->{record}{metadata}{record} = XMLin( >+ GetMarcBiblio({ biblionumber => $biblio1->biblionumber, embed_items => 1, opac => 1 })->as_xml_record() >+ ); >+ >+ test_query( >+ 'ListRecords - biblio with two deleted items', >+ $list_items, >+ { ListRecords => $expected } >+ ); >+ test_query( >+ 'ListRecords - biblio with two deleted items (items not returned)', >+ $list_no_items, >+ { ListRecords => $expected_no_items } >+ ); >+ test_query( >+ 'GetRecord - biblio with two deleted items', >+ $get_items, >+ { GetRecord => $expected } >+ ); >+ test_query( >+ 'GetRecord - biblio with two deleted items (items not returned)', >+ $get_no_items, >+ { GetRecord => $expected_no_items } >+ ); >+ >+ # Delete the biblio 10 seconds later and check results >+ set_relative_time(10); >+ $utc_datetime = dt_from_string(undef, undef, 'UTC'); >+ $utc_timestamp = $utc_datetime->ymd . 'T' . $utc_datetime->hms . 'Z'; >+ $timestamp = dt_from_string(undef, 'sql'); >+ >+ is(undef, DelBiblio($biblio1->biblionumber, { skip_record_index =>1 }), 'Biblio deleted'); >+ $sth_del_metadata->execute($timestamp, $biblio1->biblionumber); >+ >+ my $expected_header = { >+ record => { >+ header => { >+ datestamp => $utc_timestamp, >+ identifier => 'TEST:' . $biblio1->biblionumber, >+ status => 'deleted' >+ } >+ } >+ }; >+ >+ test_query( >+ 'ListRecords - deleted biblio with two deleted items', >+ $list_items, >+ { ListRecords => $expected_header } >+ ); >+ test_query( >+ 'ListRecords - deleted biblio with two deleted items (items not returned)', >+ $list_no_items, >+ { ListRecords => $expected_header } >+ ); >+ test_query( >+ 'GetRecord - deleted biblio with two deleted items', >+ $get_items, >+ { GetRecord => $expected_header } >+ ); >+ test_query( >+ 'GetRecord - deleted biblio with two deleted items (items not returned)', >+ $get_no_items, >+ { GetRecord => $expected_header } >+ ); >+ >+ # Add a second biblio 10 seconds later and check that both are returned properly >+ set_relative_time(10); >+ $utc_datetime = dt_from_string(undef, undef, 'UTC'); >+ $utc_timestamp = $utc_datetime->ymd . 'T' . $utc_datetime->hms . 'Z'; >+ $timestamp = dt_from_string(undef, 'sql'); >+ >+ my $biblio2 = $builder->build_sample_biblio(); >+ $sth_metadata->execute($timestamp, $biblio2->biblionumber); >+ >+ my $expected2 = { >+ record => [ >+ $expected_header->{record}, >+ { >+ header => { >+ datestamp => $utc_timestamp, >+ identifier => 'TEST:' . $biblio2->biblionumber >+ }, >+ metadata => { >+ record => XMLin( >+ GetMarcBiblio({ biblionumber => $biblio2->biblionumber, embed_items => 1, opac => 1 })->as_xml_record() >+ ) >+ } >+ } >+ ] >+ }; >+ my $expected2_no_items = { >+ record => [ >+ $expected_header->{record}, >+ { >+ header => { >+ datestamp => $utc_timestamp, >+ identifier => 'TEST:' . $biblio2->biblionumber >+ }, >+ metadata => { >+ record => XMLin( >+ GetMarcBiblio({ biblionumber => $biblio2->biblionumber, embed_items => 0, opac => 1 })->as_xml_record() >+ ) >+ } >+ } >+ ] >+ }; >+ >+ test_query( >+ 'ListRecords - deleted biblio and normal biblio', >+ $list_items, >+ { ListRecords => $expected2 } >+ ); >+ test_query( >+ 'ListRecords - deleted biblio and normal biblio (items not returned)', >+ $list_no_items, >+ { ListRecords => $expected2_no_items } >+ ); >+ >+ restore_time(); >+ >+ $schema->storage->txn_rollback; >+}; >diff --git a/t/db_dependent/OAI/oaiconf_items.yaml b/t/db_dependent/OAI/oaiconf_items.yaml >new file mode 100644 >index 0000000000..299c79e5fc >--- /dev/null >+++ b/t/db_dependent/OAI/oaiconf_items.yaml >@@ -0,0 +1,11 @@ >+format: >+ marcxml: >+ metadataPrefix: marcxml >+ metadataNamespace: http://www.loc.gov/MARC21/slim http://www.loc.gov/standards/marcxml/schema/MARC21slim >+ schema: http://www.loc.gov/MARC21/slim http://www.loc.gov/standards/marcxml/schema/MARC21slim.xsd >+ include_items: 0 >+ marc21: >+ metadataPrefix: marc21 >+ metadataNamespace: http://www.loc.gov/MARC21/slim http://www.loc.gov/standards/marcxml/schema/MARC21slim >+ schema: http://www.loc.gov/MARC21/slim http://www.loc.gov/standards/marcxml/schema/MARC21slim.xsd >+ include_items: 1 >-- >2.20.1
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